[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
07/13: gnu: Add r-bayesknockdown.
From: |
guix-commits |
Subject: |
07/13: gnu: Add r-bayesknockdown. |
Date: |
Mon, 13 Nov 2023 09:10:06 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 598b911334c43a1cc7d047c386f45f83d36d8aee
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Mon Nov 6 12:06:43 2023 +0100
gnu: Add r-bayesknockdown.
* gnu/packages/bioconductor.scm (r-bayesknockdown): New variable.
Change-Id: Icceffc04071efaa8a8b79144005fa7745abc7e1a
---
gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index cf7e1c07ac..d27ccce6c2 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -22757,6 +22757,30 @@ Functions are also provided to enable smooth
interoperability of multiple
Python environments in a single R session.")
(license license:gpl3)))
+(define-public r-bayesknockdown
+ (package
+ (name "r-bayesknockdown")
+ (version "1.28.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "BayesKnockdown" version))
+ (sha256
+ (base32 "1argd4gfld2yb0vvpgb5k7m6agmi58712f6g5dj4gnb7kg4rp1l8"))))
+ (properties `((upstream-name . "BayesKnockdown")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biobase))
+ (home-page "https://bioconductor.org/packages/BayesKnockdown")
+ (synopsis "Posterior probabilities for edges from knockdown data")
+ (description
+ "This package provides a simple, fast Bayesian method for computing
+posterior probabilities for relationships between a single predictor variable
+and multiple potential outcome variables, incorporating prior probabilities of
+relationships. In the context of knockdown experiments, the predictor
+variable is the knocked-down gene, while the other genes are potential
+targets. It can also be used for differential expression/2-class data.")
+ (license license:gpl3)))
+
(define-public r-biocthis
(package
(name "r-biocthis")
- branch master updated (951a1433f3 -> a0d337e79c), guix-commits, 2023/11/13
- 02/13: gnu: Add r-bags., guix-commits, 2023/11/13
- 05/13: gnu: Add r-basics., guix-commits, 2023/11/13
- 06/13: gnu: Add r-basicstarrseq., guix-commits, 2023/11/13
- 08/13: gnu: Add r-rcppdist., guix-commits, 2023/11/13
- 01/13: gnu: Add r-breastcancervdx., guix-commits, 2023/11/13
- 03/13: gnu: Add r-bsgenome-ecoli-ncbi-20080805., guix-commits, 2023/11/13
- 04/13: gnu: Add r-basic4cseq., guix-commits, 2023/11/13
- 07/13: gnu: Add r-bayesknockdown.,
guix-commits <=
- 10/13: gnu: Add r-bb., guix-commits, 2023/11/13
- 13/13: gnu: Add r-bcrank., guix-commits, 2023/11/13
- 12/13: gnu: Add r-bbcanalyzer., guix-commits, 2023/11/13
- 11/13: gnu: Add r-baynorm., guix-commits, 2023/11/13
- 09/13: gnu: Add r-bayesspace., guix-commits, 2023/11/13